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Xenon in PDB 3plg: Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide

Enzymatic activity of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide

All present enzymatic activity of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide:
1.7.3.3;

Protein crystallography data

The structure of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide, PDB code: 3plg was solved by G.Marassio, N.Colloc'h, T.Prange, J.H.Abraini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.90 / 1.60
Space group I 2 2 2
Cell size a, b, c (Å), α, β, γ (°) 80.375, 96.237, 105.513, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 19.3

Other elements in 3plg:

The structure of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide also contains other interesting chemical elements:

Sodium (Na) 1 atom

Xenon Binding Sites:

The binding sites of Xenon atom in the Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide (pdb code 3plg). This binding sites where shown within 5.0 Angstroms radius around Xenon atom.
In total only one binding site of Xenon was determined in the Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide, PDB code: 3plg:

Xenon binding site 1 out of 1 in 3plg

Go back to Xenon Binding Sites List in 3plg
Xenon binding site 1 out of 1 in the Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 1 of Urate Oxidase Under 1.0 Mpa / 10 Bars Pressure of Equimolar Mixture Xenon : Nitrous Oxide within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe801

b:34.2
occ:0.45
N2 A:N2O803 0.4 32.3 0.2
N1 A:N2O803 1.2 31.7 0.2
O3 A:N2O803 1.3 31.7 0.2
CG2 A:THR230 3.8 17.2 1.0
CB A:THR230 3.9 16.9 1.0
CD1 A:LEU252 3.9 19.5 1.0
CD2 A:LEU178 4.0 19.3 1.0
CD1 A:PHE219 4.1 19.5 1.0
CG1 A:VAL227 4.2 16.5 1.0
CE1 A:PHE219 4.3 18.9 1.0
CA A:VAL227 4.3 15.1 1.0
O A:VAL227 4.3 15.0 1.0
CE A:MET234 4.5 21.3 1.0
CG2 A:VAL227 4.6 14.5 1.0
CB A:VAL227 4.6 14.9 1.0
OG1 A:THR230 4.7 17.5 1.0
N A:MET231 4.7 16.6 1.0
CG A:LEU178 4.7 16.9 1.0
C A:VAL227 4.8 14.6 1.0
CG2 A:THR180 4.9 15.3 1.0

Reference:

G.Marassio, T.Prange, H.N.David, J.Sopkova-De Oliveira Santos, L.Gabison, N.Delcroix, J.H.Abraini, N.Colloc'h. Pressure-Response Analysis of Anesthetic Gases Xenon and Nitrous Oxide on Urate Oxidase: A Crystallographic Study. Faseb J. V. 25 2266 2011.
ISSN: ISSN 0892-6638
PubMed: 21421845
DOI: 10.1096/FJ.11-183046
Page generated: Wed Dec 16 02:39:56 2020

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