Atomistry » Xenon, Xe » PDB 1w53-3pk4 » 3cyu
Atomistry »
  Xenon, Xe »
    PDB 1w53-3pk4 »
      3cyu »

Xenon in PDB 3cyu: Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon

Enzymatic activity of Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon

All present enzymatic activity of Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon:
4.2.1.1;

Protein crystallography data

The structure of Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon, PDB code: 3cyu was solved by J.A.Aaron, K.M.Jude, L.Di Costanzo, D.W.Christianson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.72 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 67.441, 49.985, 81.038, 90.00, 107.13, 90.00
R / Rfree (%) 22.6 / 24.9

Other elements in 3cyu:

The structure of Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon also contains other interesting chemical elements:

Zinc (Zn) 1 atom

Xenon Binding Sites:

The binding sites of Xenon atom in the Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon (pdb code 3cyu). This binding sites where shown within 5.0 Angstroms radius around Xenon atom.
In total 2 binding sites of Xenon where determined in the Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon, PDB code: 3cyu:
Jump to Xenon binding site number: 1; 2;

Xenon binding site 1 out of 2 in 3cyu

Go back to Xenon Binding Sites List in 3cyu
Xenon binding site 1 out of 2 in the Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 1 of Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe265

b:44.3
occ:0.50
C07 A:0CR263 4.1 42.1 0.2
C06 A:0CR263 4.1 42.0 0.2
C60 A:1CR264 4.1 44.3 0.2
C02 A:0CR263 4.2 42.1 0.2
C09 A:1CR264 4.2 43.7 0.2
C10 A:1CR264 4.2 43.5 0.2
C24 A:1CR264 4.2 44.4 0.2
C05 A:0CR263 4.2 42.3 0.2
C03 A:0CR263 4.2 42.0 0.2
C14 A:1CR264 4.3 43.8 0.2
C21 A:0CR263 4.3 43.0 0.2
C16 A:0CR263 4.3 43.0 0.2
C04 A:0CR263 4.3 42.3 0.2
C11 A:1CR264 4.3 43.5 0.2
C25 A:1CR264 4.3 44.4 0.2
C07 A:1CR264 4.3 43.7 0.2
C13 A:1CR264 4.4 43.4 0.2
C23 A:1CR264 4.4 44.6 0.2
C09 A:0CR263 4.4 42.5 0.2
C12 A:1CR264 4.4 43.2 0.2
C16 A:1CR264 4.4 44.6 0.2
C21 A:1CR264 4.4 44.7 0.2
C02 A:1CR264 4.4 43.8 0.2
C25 A:0CR263 4.4 44.2 0.2
C24 A:0CR263 4.4 44.5 0.2
C56 A:0CR263 4.4 43.9 0.2
C17 A:0CR263 4.4 43.4 0.2
C20 A:0CR263 4.4 43.1 0.2
C14 A:0CR263 4.4 42.8 0.2
C42 A:1CR264 4.4 44.8 0.2
C41 A:1CR264 4.4 44.9 0.2
C70 A:0CR263 4.5 44.5 0.2
C06 A:1CR264 4.5 43.5 0.2
C41 A:0CR263 4.5 43.9 0.2
C17 A:1CR264 4.5 44.9 0.2
C20 A:1CR264 4.5 45.3 0.2
C40 A:0CR263 4.5 43.5 0.2
C42 A:0CR263 4.5 44.0 0.2
C38 A:0CR263 4.6 43.6 0.2
C37 A:0CR263 4.6 43.9 0.2
C26 A:0CR263 4.6 44.6 0.2
C39 A:0CR263 4.6 43.5 0.2
C26 A:1CR264 4.6 44.5 0.2
C23 A:0CR263 4.6 44.3 0.2
C18 A:0CR263 4.6 43.5 0.2
C19 A:0CR263 4.6 43.1 0.2
C37 A:1CR264 4.6 44.8 0.2
C28 A:1CR264 4.6 44.4 0.2
C34 A:0CR263 4.6 44.5 0.2
C03 A:1CR264 4.6 43.7 0.2
C51 A:1CR264 4.6 46.0 0.2
C40 A:1CR264 4.7 44.7 0.2
C34 A:1CR264 4.7 45.2 0.2
C52 A:0CR263 4.7 43.0 0.2
C18 A:1CR264 4.7 45.3 0.2
C19 A:1CR264 4.7 45.5 0.2
C10 A:0CR263 4.7 42.4 0.2
C27 A:1CR264 4.7 44.5 0.2
C35 A:0CR263 4.7 44.5 0.2
C46 A:1CR264 4.7 44.8 0.2
C35 A:1CR264 4.7 45.2 0.2
C27 A:0CR263 4.7 44.5 0.2
C08 A:0CR263 4.7 42.5 0.2
C05 A:1CR264 4.7 43.5 0.2
C33 A:1CR264 4.7 45.2 0.2
C28 A:0CR263 4.8 44.7 0.2
C30 A:1CR264 4.8 45.0 0.2
C13 A:0CR263 4.8 42.7 0.2
C33 A:0CR263 4.8 44.5 0.2
C08 A:1CR264 4.8 43.5 0.2
C38 A:1CR264 4.8 44.9 0.2
C59 A:0CR263 4.8 43.8 0.2
C04 A:1CR264 4.8 43.8 0.2
C31 A:1CR264 4.8 45.3 0.2
C32 A:1CR264 4.8 45.6 0.2
O09 A:1CR264 4.8 45.0 0.2
C39 A:1CR264 4.8 44.7 0.2
C01 A:0CR263 4.8 42.5 0.2
C15 A:0CR263 4.9 42.9 0.2
C30 A:0CR263 4.9 44.6 0.2
O09 A:0CR263 4.9 44.0 0.2
C52 A:1CR264 4.9 44.4 0.2
C47 A:0CR263 4.9 43.7 0.2
C22 A:1CR264 5.0 44.5 0.2
C01 A:1CR264 5.0 44.4 0.2
C32 A:0CR263 5.0 44.7 0.2
O02 A:0CR263 5.0 42.1 0.2

Xenon binding site 2 out of 2 in 3cyu

Go back to Xenon Binding Sites List in 3cyu
Xenon binding site 2 out of 2 in the Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 2 of Human Carbonic Anhydrase II Complexed with Cryptophane Biosensor and Xenon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe266

b:42.1
occ:0.37
CD2 A:PHE226 3.2 36.5 1.0
CE2 A:PHE226 3.4 37.4 1.0
CG A:PHE226 3.6 32.9 1.0
CG2 A:VAL223 3.7 35.0 1.0
CB A:ALA116 3.8 22.6 1.0
CA A:VAL223 3.9 29.8 1.0
CZ A:PHE226 4.0 34.9 1.0
CD2 A:LEU148 4.0 23.2 1.0
CB A:VAL223 4.0 31.9 1.0
CD1 A:PHE226 4.1 34.9 1.0
CB A:PHE226 4.2 30.4 1.0
CB A:TRP97 4.2 25.2 1.0
CE1 A:PHE226 4.3 34.6 1.0
CG A:TRP97 4.6 24.3 1.0
N A:VAL223 4.8 27.6 1.0
O A:VAL223 4.8 30.6 1.0
C A:VAL223 4.9 30.3 1.0
CG2 A:VAL218 5.0 24.3 1.0

Reference:

J.A.Aaron, J.M.Chambers, K.M.Jude, L.Di Costanzo, I.J.Dmochowski, D.W.Christianson. Structure of A 129XE-Cryptophane Biosensor Complexed with Human Carbonic Anhydrase II. J.Am.Chem.Soc. V. 130 6942 2008.
ISSN: ISSN 0002-7863
PubMed: 18461940
DOI: 10.1021/JA802214X
Page generated: Wed Dec 16 02:39:45 2020

Last articles

Zn in 7M6U
Zn in 7NNG
Zn in 7NEE
Zn in 7NEU
Zn in 7M3K
Zn in 7KWD
Zn in 7KYH
Zn in 7KNG
Zn in 7KY2
Zn in 7KYF
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy