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Xenon in PDB 2ie6: Annexin V Under 2.0 Mpa Pressure of Xenon

Protein crystallography data

The structure of Annexin V Under 2.0 Mpa Pressure of Xenon, PDB code: 2ie6 was solved by N.Colloc'h, J.Sopkova-De Oliveira Santos, T.Prange, A.Brisson, B.Langloisd'estainto, B.Gallois, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 14.39 / 1.83
Space group H 3
Cell size a, b, c (Å), α, β, γ (°) 156.985, 156.985, 37.336, 90.00, 90.00, 120.00
R / Rfree (%) 16.8 / 20

Other elements in 2ie6:

The structure of Annexin V Under 2.0 Mpa Pressure of Xenon also contains other interesting chemical elements:

Calcium (Ca) 6 atoms

Xenon Binding Sites:

The binding sites of Xenon atom in the Annexin V Under 2.0 Mpa Pressure of Xenon (pdb code 2ie6). This binding sites where shown within 5.0 Angstroms radius around Xenon atom.
In total only one binding site of Xenon was determined in the Annexin V Under 2.0 Mpa Pressure of Xenon, PDB code: 2ie6:

Xenon binding site 1 out of 1 in 2ie6

Go back to Xenon Binding Sites List in 2ie6
Xenon binding site 1 out of 1 in the Annexin V Under 2.0 Mpa Pressure of Xenon


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 1 of Annexin V Under 2.0 Mpa Pressure of Xenon within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe450

b:36.4
occ:0.40
CG2 A:THR227 2.9 23.8 1.0
CD2 A:PHE192 3.7 21.2 1.0
CE2 A:PHE192 3.7 20.1 1.0
CG A:PHE192 3.8 18.3 1.0
CD1 A:LEU235 3.9 27.2 1.0
CZ A:PHE192 3.9 21.6 1.0
CG2 A:THR187 3.9 18.0 1.0
CD1 A:PHE192 4.0 21.9 1.0
CE1 A:PHE192 4.0 21.4 1.0
CB A:GLU226 4.0 20.6 1.0
CB A:THR227 4.2 23.2 1.0
OG1 A:THR227 4.4 24.6 1.0
CA A:ILE223 4.5 17.4 1.0
CB A:PHE192 4.6 16.7 1.0
CG1 A:ILE223 4.6 19.4 1.0
N A:THR227 4.8 22.9 1.0
CG A:GLU226 4.8 18.1 1.0
C A:GLU226 4.9 22.9 1.0
O A:ILE223 4.9 17.4 1.0

Reference:

N.Colloc'h, J.Sopkova-De Oliveira Santos, P.Retailleau, B.Langlois D'estainto, B.Gallois, A.Brisson, J.J.Risso, M.Lemaire, J.H.Abraini. Protein Crystallography Under Xenon and Nitrous Oxide Pressure: Comparison with in Vivo Pharmacology Studies and Implications For the Mechanism of Inhaled Anesthetic Action Biophys.J. V. 92 217 2007.
ISSN: ISSN 0006-3495
PubMed: 17028130
DOI: 10.1529/BIOPHYSJ.106.093807
Page generated: Wed Dec 16 02:39:37 2020

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