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Xenon in PDB 2a7c: On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength

Enzymatic activity of On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength

All present enzymatic activity of On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength:
3.4.21.36;

Protein crystallography data

The structure of On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength, PDB code: 2a7c was solved by C.Mueller-Dieckmann, S.Panjikar, P.A.Tucker, M.S.Weiss, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.65
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 50.350, 58.020, 74.740, 90.00, 90.00, 90.00
R / Rfree (%) 15.5 / 18.2

Xenon Binding Sites:

The binding sites of Xenon atom in the On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength (pdb code 2a7c). This binding sites where shown within 5.0 Angstroms radius around Xenon atom.
In total only one binding site of Xenon was determined in the On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength, PDB code: 2a7c:

Xenon binding site 1 out of 1 in 2a7c

Go back to Xenon Binding Sites List in 2a7c
Xenon binding site 1 out of 1 in the On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 1 of On the Routine Use of Soft X-Rays in Macromolecular Crystallography, Part III- the Optimal Data Collection Wavelength within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe505

b:11.3
occ:0.72
 OG A:SER188 3.6 10.0 1.0
O A:CYS184 3.7 6.5 1.0
C A:CYS184 3.8 6.4 1.0
CG1 A:VAL209 4.0 8.5 1.0
O1 A:SO4502 4.1 4.8 0.5
CG2 A:THR206 4.1 7.0 1.0
CG2 A:VAL209 4.2 6.1 1.0
N A:GLN185 4.2 7.0 1.0
N A:VAL209 4.3 7.1 1.0
CA A:CYS184 4.3 5.2 1.0
CA A:PHE208 4.3 6.2 1.0
N A:CYS184 4.3 5.7 1.0
C A:PHE208 4.3 6.6 1.0
O3 A:SO4502 4.3 15.5 0.5
O A:HOH722 4.4 12.8 1.0
N A:SER188 4.5 6.1 1.0
CA A:GLN185 4.5 5.8 1.0
N A:PHE208 4.6 6.6 1.0
O A:SER207 4.6 7.2 1.0
CB A:VAL209 4.6 7.0 1.0
O A:HOH700 4.7 22.4 1.0
C A:SER207 4.7 7.0 1.0
C A:GLY183 4.7 5.1 1.0
CB A:SER188 4.8 8.5 1.0
CA A:SER188 4.8 6.2 1.0
S A:SO4502 4.8 9.4 0.5
O A:PHE208 4.9 6.5 1.0

Reference:

C.Mueller-Dieckmann, S.Panjikar, P.A.Tucker, M.S.Weiss. On the Routine Use of Soft X-Rays in Macromolecular Crystallography. Part III. the Optimal Data-Collection Wavelength. Acta Crystallogr.,Sect.D V. 61 1263 2005.
ISSN: ISSN 0907-4449
PubMed: 16131760
DOI: 10.1107/S0907444905021475
Page generated: Wed Dec 16 02:39:36 2020

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