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Xenon in PDB 1uvy: Heme-Ligand Tunneling in Group I Truncated Hemoglobins

Protein crystallography data

The structure of Heme-Ligand Tunneling in Group I Truncated Hemoglobins, PDB code: 1uvy was solved by M.Milani, A.Pesce, Y.Ouellet, S.Dewilde, J.Friedman, P.Ascenzi, M.Guertin, M.Bolognesi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.4
Space group P 43
Cell size a, b, c (Å), α, β, γ (°) 61.380, 61.380, 33.840, 90.00, 90.00, 90.00
R / Rfree (%) 21.1 / 28.2

Other elements in 1uvy:

The structure of Heme-Ligand Tunneling in Group I Truncated Hemoglobins also contains other interesting chemical elements:

Iron (Fe) 1 atom

Xenon Binding Sites:

The binding sites of Xenon atom in the Heme-Ligand Tunneling in Group I Truncated Hemoglobins (pdb code 1uvy). This binding sites where shown within 5.0 Angstroms radius around Xenon atom.
In total only one binding site of Xenon was determined in the Heme-Ligand Tunneling in Group I Truncated Hemoglobins, PDB code: 1uvy:

Xenon binding site 1 out of 1 in 1uvy

Go back to Xenon Binding Sites List in 1uvy
Xenon binding site 1 out of 1 in the Heme-Ligand Tunneling in Group I Truncated Hemoglobins


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 1 of Heme-Ligand Tunneling in Group I Truncated Hemoglobins within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe1118

b:36.8
occ:1.00
CG1 A:VAL15 3.5 33.4 1.0
CG1 A:VAL12 3.9 29.9 1.0
CG2 A:THR102 4.0 37.4 1.0
CB A:VAL15 4.0 33.5 1.0
CD1 A:LEU53 4.1 39.6 1.0
CA A:VAL12 4.2 31.1 1.0
CD2 A:LEU89 4.2 31.0 1.0
O A:VAL12 4.3 30.3 1.0
CB A:VAL12 4.4 31.6 1.0
CD1 A:LEU85 4.4 38.5 1.0
CD1 A:LEU49 4.5 38.1 1.0
OG1 A:THR16 4.5 33.8 1.0
CG2 A:VAL12 4.6 32.8 1.0
CD1 A:LEU6 4.7 33.7 1.0
C A:VAL12 4.7 31.1 1.0
CB A:LEU49 4.8 37.3 1.0
CG2 A:VAL15 4.8 33.0 1.0
CG A:LEU89 4.9 30.8 1.0

Reference:

M.Milani, A.Pesce, Y.Ouellet, S.Dewilde, J.Friedman, P.Ascenzi, M.Guertin, M.Bolognesi. Heme-Ligand Tunneling in Group I Truncated Hemoglobins J.Biol.Chem. V. 279 21520 2004.
ISSN: ISSN 0021-9258
PubMed: 15016811
DOI: 10.1074/JBC.M401320200
Page generated: Wed Dec 16 02:39:26 2020

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