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Xenon in PDB 1c3l: Subtilisin-Carlsberg Complexed with Xenon (8 Bar)

Enzymatic activity of Subtilisin-Carlsberg Complexed with Xenon (8 Bar)

All present enzymatic activity of Subtilisin-Carlsberg Complexed with Xenon (8 Bar):
3.4.21.62;

Protein crystallography data

The structure of Subtilisin-Carlsberg Complexed with Xenon (8 Bar), PDB code: 1c3l was solved by T.Prange, M.Schiltz, L.Pernot, N.Colloc'h, S.Longhi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 7.00 / 2.16
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 76.500, 55.300, 53.400, 90.00, 90.00, 90.00
R / Rfree (%) 15.1 / 19.8

Other elements in 1c3l:

The structure of Subtilisin-Carlsberg Complexed with Xenon (8 Bar) also contains other interesting chemical elements:

Calcium (Ca) 2 atoms

Xenon Binding Sites:

The binding sites of Xenon atom in the Subtilisin-Carlsberg Complexed with Xenon (8 Bar) (pdb code 1c3l). This binding sites where shown within 5.0 Angstroms radius around Xenon atom.
In total only one binding site of Xenon was determined in the Subtilisin-Carlsberg Complexed with Xenon (8 Bar), PDB code: 1c3l:

Xenon binding site 1 out of 1 in 1c3l

Go back to Xenon Binding Sites List in 1c3l
Xenon binding site 1 out of 1 in the Subtilisin-Carlsberg Complexed with Xenon (8 Bar)


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 1 of Subtilisin-Carlsberg Complexed with Xenon (8 Bar) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe281

b:35.8
occ:0.70
OG A:SER221 3.9 15.2 1.0
CB A:ALA152 4.0 12.9 1.0
ND2 A:ASN155 4.0 24.5 1.0
O1 A:FMT285 4.0 25.3 1.0
OG1 A:THR220 4.1 11.0 1.0
N A:GLY127 4.1 7.2 1.0
O A:HOH408 4.1 50.0 1.0
CA A:LEU126 4.2 14.4 1.0
C A:LEU126 4.2 9.9 1.0
O A:HOH377 4.4 34.2 1.0
N A:LEU126 4.4 18.6 1.0
CA A:GLY154 4.5 11.8 1.0
C A:SER125 4.7 5.2 1.0
CG A:ASN155 4.7 28.4 1.0
O A:LEU126 4.7 10.1 1.0
O A:SER125 4.8 10.8 1.0
CA A:GLY127 4.8 16.2 1.0
N A:GLY154 4.8 12.4 1.0
N A:ASN155 4.9 14.3 1.0
C A:FMT285 4.9 37.2 1.0
C A:GLY154 5.0 15.1 1.0

Reference:

T.Prange, M.Schiltz, L.Pernot, N.Colloc'h, S.Longhi, W.Bourguet, R.Fourme. Exploring Hydrophobic Sites in Proteins with Xenon or Krypton. Proteins V. 30 61 1998.
ISSN: ISSN 0887-3585
PubMed: 9443341
DOI: 10.1002/(SICI)1097-0134(19980101)30:1<61::AID-PROT6>3.3.CO;2-O
Page generated: Wed Dec 16 02:39:17 2020

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