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Xenon in PDB 1c1m: Porcine Elastase Under Xenon Pressure (8 Bar)

Enzymatic activity of Porcine Elastase Under Xenon Pressure (8 Bar)

All present enzymatic activity of Porcine Elastase Under Xenon Pressure (8 Bar):
3.4.21.36;

Protein crystallography data

The structure of Porcine Elastase Under Xenon Pressure (8 Bar), PDB code: 1c1m was solved by T.Prange, M.Schiltz, L.Pernot, N.Colloc'h, S.Longhi, W.Bourguet, R.Fourme, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 17.70 / 2.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.190, 58.220, 75.770, 90.00, 90.00, 90.00
R / Rfree (%) 16.2 / 20.1

Other elements in 1c1m:

The structure of Porcine Elastase Under Xenon Pressure (8 Bar) also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Xenon Binding Sites:

The binding sites of Xenon atom in the Porcine Elastase Under Xenon Pressure (8 Bar) (pdb code 1c1m). This binding sites where shown within 5.0 Angstroms radius around Xenon atom.
In total only one binding site of Xenon was determined in the Porcine Elastase Under Xenon Pressure (8 Bar), PDB code: 1c1m:

Xenon binding site 1 out of 1 in 1c1m

Go back to Xenon Binding Sites List in 1c1m
Xenon binding site 1 out of 1 in the Porcine Elastase Under Xenon Pressure (8 Bar)


Mono view


Stereo pair view

A full contact list of Xenon with other atoms in the Xe binding site number 1 of Porcine Elastase Under Xenon Pressure (8 Bar) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Xe260

b:27.4
occ:1.00
OG A:SER195 3.4 3.6 1.0
O A:CYS191 3.7 7.6 1.0
C A:CYS191 3.8 7.3 1.0
CG1 A:VAL216 4.1 0.0 1.0
CA A:PHE215 4.2 5.5 1.0
N A:GLN192 4.2 4.2 1.0
O A:HOH393 4.2 35.8 1.0
CG2 A:THR213 4.2 2.9 1.0
N A:VAL216 4.3 5.3 1.0
CA A:CYS191 4.3 1.9 1.0
CG2 A:VAL216 4.3 3.9 1.0
C A:PHE215 4.3 13.1 1.0
N A:CYS191 4.4 0.0 1.0
CA A:GLN192 4.4 4.5 1.0
N A:PHE215 4.5 7.7 1.0
O A:SER214 4.6 7.0 1.0
N A:SER195 4.6 0.0 1.0
CB A:SER195 4.7 6.8 1.0
C A:SER214 4.7 5.9 1.0
CB A:VAL216 4.7 8.6 1.0
C A:GLY190 4.9 0.0 1.0
CA A:SER195 4.9 9.8 1.0
O A:PHE215 4.9 5.4 1.0

Reference:

T.Prange, M.Schiltz, L.Pernot, N.Colloc'h, S.Longhi, W.Bourguet, R.Fourme. Exploring Hydrophobic Sites in Proteins with Xenon or Krypton. Proteins V. 30 61 1998.
ISSN: ISSN 0887-3585
PubMed: 9443341
DOI: 10.1002/(SICI)1097-0134(19980101)30:1<61::AID-PROT6>3.3.CO;2-O
Page generated: Wed Dec 16 02:39:17 2020

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